J3_5MRE_026

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CAU*AAUU*AGAAAG

Length

13 nucleotides

Bulged bases

5MRE|1|aa|U|1189

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|aa|C|1162
5MRE|1|aa|A|1163
5MRE|1|aa|U|1164
*
5MRE|1|aa|A|1187
5MRE|1|aa|A|1188
5MRE|1|aa|U|1189
5MRE|1|aa|U|1190
*
5MRE|1|aa|A|1212
5MRE|1|aa|G|1213
5MRE|1|aa|A|1214
5MRE|1|aa|A|1215
5MRE|1|aa|A|1216
5MRE|1|aa|G|1217

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain CC

uS3m

Chain II

uS9m

Chain JJ

uS10m

Chain NN

uS14m