J3_5MRE_028

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CGAUCUA*UAGUAG*CAAAUCUGG

Length

22 nucleotides

Bulged bases

5MRE|1|A|U|595, 5MRE|1|A|A|680, 5MRE|1|A|U|681, 5MRE|1|A|U|683

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|A|C|592
5MRE|1|A|G|593
5MRE|1|A|A|594
5MRE|1|A|U|595
5MRE|1|A|C|596
5MRE|1|A|U|597
5MRE|1|A|A|598
*
5MRE|1|A|U|664
5MRE|1|A|A|665
5MRE|1|A|G|666
5MRE|1|A|U|667
5MRE|1|A|A|668
5MRE|1|A|G|669
*
5MRE|1|A|C|677
5MRE|1|A|A|678
5MRE|1|A|A|679
5MRE|1|A|A|680
5MRE|1|A|U|681
5MRE|1|A|C|682
5MRE|1|A|U|683
5MRE|1|A|G|684
5MRE|1|A|G|685

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

uL2m

Chain O

uL22m

Chain Y

bL34m