J3_5MRE_033

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GACUUAAG*CUAGUAA*UGAAUAUUCUAAC

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|aa|G|997
5MRE|1|aa|A|998
5MRE|1|aa|C|999
5MRE|1|aa|U|1000
5MRE|1|aa|U|1001
5MRE|1|aa|A|1002
5MRE|1|aa|A|1003
5MRE|1|aa|G|1004
*
5MRE|1|aa|C|1412
5MRE|1|aa|U|1413
5MRE|1|aa|A|1414
5MRE|1|aa|G|1415
5MRE|1|aa|U|1416
5MRE|1|aa|A|1417
5MRE|1|aa|A|1418
*
5MRE|1|aa|U|1441
5MRE|1|aa|G|1442
5MRE|1|aa|A|1443
5MRE|1|aa|A|1444
5MRE|1|aa|U|1445
5MRE|1|aa|A|1446
5MRE|1|aa|U|1447
5MRE|1|aa|U|1448
5MRE|1|aa|C|1449
5MRE|1|aa|U|1450
5MRE|1|aa|A|1451
5MRE|1|aa|A|1452
5MRE|1|aa|C|1453

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain GG

uS7m

Chain II

uS9m

Chain ZZ

mS37

Chain bb

Transfer RNA; tRNA