J3_5MRF_013
3D structure
- PDB id
- 5MRF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast mitochondrial ribosome - Class C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.97 Å
Loop
- Sequence
- UUUC*GUU*AUUAAAA
- Length
- 14 nucleotides
- Bulged bases
- 5MRF|1|A|U|2784, 5MRF|1|A|U|2785
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5MRF_013 not in the Motif Atlas
- Homologous match to J3_5J7L_046
- Geometric discrepancy: 0.1396
- The information below is about J3_5J7L_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.5
- Basepair signature
- cWW-tWH-cHW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
5MRF|1|A|U|2783
5MRF|1|A|U|2784
5MRF|1|A|U|2785
5MRF|1|A|C|2786
*
5MRF|1|A|G|2812
5MRF|1|A|U|2813
5MRF|1|A|U|2814
*
5MRF|1|A|A|2828
5MRF|1|A|U|2829
5MRF|1|A|U|2830
5MRF|1|A|A|2831
5MRF|1|A|A|2832
5MRF|1|A|A|2833
5MRF|1|A|A|2834
Current chains
- Chain A
- 21S ribosomal RNA
Nearby chains
- Chain I
- uL14m
Coloring options: