J3_5MRF_028

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

CGAUCUA*UAGUAG*CAAAUCUGG

Length

22 nucleotides

Bulged bases

5MRF|1|A|U|595, 5MRF|1|A|A|680, 5MRF|1|A|U|681, 5MRF|1|A|U|683

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRF|1|A|C|592
5MRF|1|A|G|593
5MRF|1|A|A|594
5MRF|1|A|U|595
5MRF|1|A|C|596
5MRF|1|A|U|597
5MRF|1|A|A|598
*
5MRF|1|A|U|664
5MRF|1|A|A|665
5MRF|1|A|G|666
5MRF|1|A|U|667
5MRF|1|A|A|668
5MRF|1|A|G|669
*
5MRF|1|A|C|677
5MRF|1|A|A|678
5MRF|1|A|A|679
5MRF|1|A|A|680
5MRF|1|A|U|681
5MRF|1|A|C|682
5MRF|1|A|U|683
5MRF|1|A|G|684
5MRF|1|A|G|685

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

uL2m

Chain O

uL22m

Chain Y

bL34m