J3_5MRF_033

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

GACUUAAG*CUAGUAA*UGAAUAUUCUAAC

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRF|1|aa|G|997
5MRF|1|aa|A|998
5MRF|1|aa|C|999
5MRF|1|aa|U|1000
5MRF|1|aa|U|1001
5MRF|1|aa|A|1002
5MRF|1|aa|A|1003
5MRF|1|aa|G|1004
*
5MRF|1|aa|C|1412
5MRF|1|aa|U|1413
5MRF|1|aa|A|1414
5MRF|1|aa|G|1415
5MRF|1|aa|U|1416
5MRF|1|aa|A|1417
5MRF|1|aa|A|1418
*
5MRF|1|aa|U|1441
5MRF|1|aa|G|1442
5MRF|1|aa|A|1443
5MRF|1|aa|A|1444
5MRF|1|aa|U|1445
5MRF|1|aa|A|1446
5MRF|1|aa|U|1447
5MRF|1|aa|U|1448
5MRF|1|aa|C|1449
5MRF|1|aa|U|1450
5MRF|1|aa|A|1451
5MRF|1|aa|A|1452
5MRF|1|aa|C|1453

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain GG

uS7m

Chain II

uS9m

Chain ZZ

mS37

Chain bb

Transfer RNA; tRNA