J3_5NWY_037

3D structure

PDB id

5NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAG*UGUGC*GAAC

Length

13 nucleotides

Bulged bases

5NWY|1|0|G|1024, 5NWY|1|0|U|1025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5NWY|1|0|G|1003
5NWY|1|0|A|1004
5NWY|1|0|A|1005
5NWY|1|0|G|1006
*
5NWY|1|0|U|1023
5NWY|1|0|G|1024
5NWY|1|0|U|1025
5NWY|1|0|G|1026
5NWY|1|0|C|1027
*
5NWY|1|0|G|1034
5NWY|1|0|A|1035
5NWY|1|0|A|1036
5NWY|1|0|C|1037

Current chains

Chain 0

16S rRNA

Nearby chains

Chain D

30S ribosomal protein S14