J3_5ON6_074
3D structure
- PDB id
- 5ON6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of haemanthamine bound to the 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AGAUAAAAAAUCAAUG*CUCUUUG*CAU
- Length
- 26 nucleotides
- Bulged bases
- 5ON6|1|A|A|217, 5ON6|1|A|U|238, 5ON6|1|A|C|239, 5ON6|1|A|U|240
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ON6|1|A|A|213
5ON6|1|A|G|214
5ON6|1|A|A|215
5ON6|1|A|U|216
5ON6|1|A|A|217
5ON6|1|A|A|218
5ON6|1|A|A|219
5ON6|1|A|A|220
5ON6|1|A|A|221
5ON6|1|A|A|222
5ON6|1|A|U|223
5ON6|1|A|C|224
5ON6|1|A|A|225
5ON6|1|A|A|226
5ON6|1|A|U|227
5ON6|1|A|G|228
*
5ON6|1|A|C|237
5ON6|1|A|U|238
5ON6|1|A|C|239
5ON6|1|A|U|240
5ON6|1|A|U|241
5ON6|1|A|U|242
5ON6|1|A|G|243
*
5ON6|1|A|C|250
5ON6|1|A|A|251
5ON6|1|A|U|252
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S4-A
- Chain H
- 40S ribosomal protein S6-A
- Chain J
- 40S ribosomal protein S8-A
- Chain M
- 40S ribosomal protein S11-A
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