J3_5T7V_012

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAUUG*CAA*UAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5T7V_012 not in the Motif Atlas

Homologous match to J3_4WF9_004

Geometric discrepancy: 0.1319

The information below is about J3_4WF9_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.7

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

5T7V|1|B|C|1335
5T7V|1|B|G|1336
5T7V|1|B|A|1337
5T7V|1|B|U|1338
5T7V|1|B|U|1339
5T7V|1|B|G|1340
*
5T7V|1|B|C|1669
5T7V|1|B|A|1670
5T7V|1|B|A|1671
*
5T7V|1|B|U|1683
5T7V|1|B|A|1684
5T7V|1|B|A|1685
5T7V|1|B|G|1686

Current chains

Chain B

23S ribosomal RNA

Nearby chains