J3_5T7V_029
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCU*ACUUAGUGAUCC*GCUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 5T7V|1|B|U|2417, 5T7V|1|B|A|2453
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5T7V_029 not in the Motif Atlas
- Homologous match to J3_7A0S_020
- Geometric discrepancy: 0.1684
- The information below is about J3_7A0S_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_20992.1
- Basepair signature
- cWW-F-F-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
5T7V|1|B|G|2309
5T7V|1|B|C|2310
5T7V|1|B|U|2311
*
5T7V|1|B|A|2411
5T7V|1|B|C|2412
5T7V|1|B|U|2413
5T7V|1|B|U|2414
5T7V|1|B|A|2415
5T7V|1|B|G|2416
5T7V|1|B|U|2417
5T7V|1|B|G|2418
5T7V|1|B|A|2419
5T7V|1|B|U|2420
5T7V|1|B|C|2421
5T7V|1|B|C|2422
*
5T7V|1|B|G|2448
5T7V|1|B|C|2449
5T7V|1|B|U|2450
5T7V|1|B|C|2451
5T7V|1|B|A|2452
5T7V|1|B|A|2453
5T7V|1|B|C|2454
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain L9
- 50S ribosomal protein L27
- Chain LF
- 50S ribosomal protein L33
- Chain LH
- 50S ribosomal protein L35
- Chain LO
- 50S ribosomal protein L15
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