J3_5T7V_034

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCGCACAAG*CUAGUAA*UGAAUACGUUCCCGG

Length

31 nucleotides

Bulged bases

5T7V|1|A|A|1356, 5T7V|1|A|U|1391

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T7V|1|A|C|940
5T7V|1|A|C|941
5T7V|1|A|G|942
5T7V|1|A|C|943
5T7V|1|A|A|944
5T7V|1|A|C|945
5T7V|1|A|A|946
5T7V|1|A|A|947
5T7V|1|A|G|948
*
5T7V|1|A|C|1354
5T7V|1|A|U|1355
5T7V|1|A|A|1356
5T7V|1|A|G|1357
5T7V|1|A|U|1358
5T7V|1|A|A|1359
5T7V|1|A|A|1360
*
5T7V|1|A|U|1382
5T7V|1|A|G|1383
5T7V|1|A|A|1384
5T7V|1|A|A|1385
5T7V|1|A|U|1386
5T7V|1|A|A|1387
5T7V|1|A|C|1388
5T7V|1|A|G|1389
5T7V|1|A|U|1390
5T7V|1|A|U|1391
5T7V|1|A|C|1392
5T7V|1|A|C|1393
5T7V|1|A|C|1394
5T7V|1|A|G|1395
5T7V|1|A|G|1396

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain D

Transfer RNA; tRNA