J3_5T7V_041
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAUAGCU*AGCAGGGGAUUGAAAAUCCCCGUGUCC*GUC
- Length
- 37 nucleotides
- Bulged bases
- 5T7V|1|D|U|8, 5T7V|1|D|U|33, 5T7V|1|D|G|34, 5T7V|1|D|U|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T7V|1|D|G|6
5T7V|1|D|A|7
5T7V|1|D|U|8
5T7V|1|D|A|9
5T7V|1|D|G|10
5T7V|1|D|C|11
5T7V|1|D|U|12
*
5T7V|1|D|A|23
5T7V|1|D|G|24
5T7V|1|D|C|25
5T7V|1|D|A|26
5T7V|1|D|G|27
5T7V|1|D|G|28
5T7V|1|D|G|29
5T7V|1|D|G|30
5T7V|1|D|A|31
5T7V|1|D|U|32
5T7V|1|D|U|33
5T7V|1|D|G|34
5T7V|1|D|A|35
5T7V|1|D|A|36
5T7V|1|D|A|37
5T7V|1|D|A|38
5T7V|1|D|U|39
5T7V|1|D|C|40
5T7V|1|D|C|41
5T7V|1|D|C|42
5T7V|1|D|C|43
5T7V|1|D|G|44
5T7V|1|D|U|45
5T7V|1|D|G|46
5T7V|1|D|U|47
5T7V|1|D|C|48
5T7V|1|D|C|49
*
5T7V|1|D|G|65
5T7V|1|D|U|66
5T7V|1|D|C|67
Current chains
- Chain D
- E-site tRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain LF
- 50S ribosomal protein L33
- Chain S2
- 30S ribosomal protein S11
Coloring options: