J3_5TBW_063
3D structure
- PDB id
- 5TBW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UU*AGAAGU*ACAUUUGA
- Length
- 16 nucleotides
- Bulged bases
- 5TBW|1|1|A|1065, 5TBW|1|1|U|1094, 5TBW|1|1|U|1095
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11066.2
- Basepair signature
- cWW-cWW-cSS-F-cWW-F-F-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
5TBW|1|1|U|986
5TBW|1|1|U|987
*
5TBW|1|1|A|1062
5TBW|1|1|G|1063
5TBW|1|1|A|1064
5TBW|1|1|A|1065
5TBW|1|1|G|1066
5TBW|1|1|U|1067
*
5TBW|1|1|A|1091
5TBW|1|1|C|1092
5TBW|1|1|A|1093
5TBW|1|1|U|1094
5TBW|1|1|U|1095
5TBW|1|1|U|1096
5TBW|1|1|G|1097
5TBW|1|1|A|1098
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 2
- 60S ribosomal protein L21-A
- Chain AC
- 60S ribosomal protein L29
- Chain o
- 60S ribosomal protein L7-A
Coloring options: