J3_5TGA_066

3D structure

PDB id

5TGA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UAUCAU*GCGUU*ACUAAUA

Length

18 nucleotides

Bulged bases

5TGA|1|1|A|2887

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5TGA|1|1|U|2886
5TGA|1|1|A|2887
5TGA|1|1|U|2888
5TGA|1|1|C|2889
5TGA|1|1|A|2890
5TGA|1|1|U|2891
*
5TGA|1|1|G|2912
5TGA|1|1|C|2913
5TGA|1|1|G|2914
5TGA|1|1|U|2915
5TGA|1|1|U|2916
*
5TGA|1|1|A|2930
5TGA|1|1|C|2931
5TGA|1|1|U|2932
5TGA|1|1|A|2933
5TGA|1|1|A|2934
5TGA|1|1|U|2935
5TGA|1|1|A|2936

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain L3

60S ribosomal protein L3

Chain M6

60S ribosomal protein L16-A

Chain N3

60S ribosomal protein L23-A