J3_5TGA_086
3D structure
- PDB id
- 5TGA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- AGAUAAAAAAUCAAUGUC*GACUCUUUG*CAU
- Length
- 30 nucleotides
- Bulged bases
- 5TGA|1|6|U|240
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TGA|1|6|A|213
5TGA|1|6|G|214
5TGA|1|6|A|215
5TGA|1|6|U|216
5TGA|1|6|A|217
5TGA|1|6|A|218
5TGA|1|6|A|219
5TGA|1|6|A|220
5TGA|1|6|A|221
5TGA|1|6|A|222
5TGA|1|6|U|223
5TGA|1|6|C|224
5TGA|1|6|A|225
5TGA|1|6|A|226
5TGA|1|6|U|227
5TGA|1|6|G|228
5TGA|1|6|U|229
5TGA|1|6|C|230
*
5TGA|1|6|G|235
5TGA|1|6|A|236
5TGA|1|6|C|237
5TGA|1|6|U|238
5TGA|1|6|C|239
5TGA|1|6|U|240
5TGA|1|6|U|241
5TGA|1|6|U|242
5TGA|1|6|G|243
*
5TGA|1|6|C|250
5TGA|1|6|A|251
5TGA|1|6|U|252
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c1
- 40S ribosomal protein S11-A
- Chain s4
- 40S ribosomal protein S4-A
- Chain s6
- 40S ribosomal protein S6-A
- Chain s8
- 40S ribosomal protein S8-A
Coloring options: