J3_5TGA_088
3D structure
- PDB id
- 5TGA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CAUCA*UAACUACUG*CAUUUG
- Length
- 20 nucleotides
- Bulged bases
- 5TGA|1|6|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5TGA|1|6|C|880
5TGA|1|6|A|881
5TGA|1|6|U|882
5TGA|1|6|C|883
5TGA|1|6|A|884
*
5TGA|1|6|U|928
5TGA|1|6|A|929
5TGA|1|6|A|930
5TGA|1|6|C|931
5TGA|1|6|U|932
5TGA|1|6|A|933
5TGA|1|6|C|934
5TGA|1|6|U|935
5TGA|1|6|G|936
*
5TGA|1|6|C|943
5TGA|1|6|A|944
5TGA|1|6|U|945
5TGA|1|6|U|946
5TGA|1|6|U|947
5TGA|1|6|G|948
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain c3
- 40S ribosomal protein S13
- Chain c4
- 40S ribosomal protein S14-B
- Chain d6
- 40S ribosomal protein S26-B
- Chain o0
- 60S ribosomal protein L30
- Chain q3
- 60S ribosomal protein L43-A
- Chain s1
- 40S ribosomal protein S1-A
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