J3_5U9F_010
3D structure
- PDB id
- 5U9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUAAU*AGGUUAG*CAUAAG
- Length
- 18 nucleotides
- Bulged bases
- 5U9F|1|01|U|2334, 5U9F|1|01|A|2336
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5U9F|1|01|C|2295
5U9F|1|01|U|2296
5U9F|1|01|A|2297
5U9F|1|01|A|2298
5U9F|1|01|U|2299
*
5U9F|1|01|A|2317
5U9F|1|01|G|2318
5U9F|1|01|G|2319
5U9F|1|01|U|2320
5U9F|1|01|U|2321
5U9F|1|01|A|2322
5U9F|1|01|G|2323
*
5U9F|1|01|C|2332
5U9F|1|01|A|2333
5U9F|1|01|U|2334
5U9F|1|01|A|2335
5U9F|1|01|A|2336
5U9F|1|01|G|2337
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 02
- 5S ribosomal RNA; 5S rRNA
- Chain 07
- 50S ribosomal protein L5
- Chain 17
- 50S ribosomal protein L18
- Chain 25
- 50S ribosomal protein L27
- Chain W
- Transfer RNA; tRNA
Coloring options: