J3_5U9F_025

3D structure

PDB id

5U9F (explore in PDB, NAKB, or RNA 3D Hub)

Description

3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUAU*AGAC*GGUGG

Length

13 nucleotides

Bulged bases

5U9F|1|A|U|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5U9F|1|A|U|1115
5U9F|1|A|U|1116
5U9F|1|A|A|1117
5U9F|1|A|U|1118
*
5U9F|1|A|A|1155
5U9F|1|A|G|1156
5U9F|1|A|A|1157
5U9F|1|A|C|1158
*
5U9F|1|A|G|1181
5U9F|1|A|G|1182
5U9F|1|A|U|1183
5U9F|1|A|G|1184
5U9F|1|A|G|1185

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain B

30S ribosomal protein S2

Chain G

30S ribosomal protein S7

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14