J3_5U9F_032
3D structure
- PDB id
- 5U9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCCUAAC*GGGGAAUAUUGC*GCAGC
- Length
- 24 nucleotides
- Bulged bases
- 5U9F|1|A|A|50, 5U9F|1|A|A|51, 5U9F|1|A|U|368, 5U9F|1|A|G|394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5U9F|1|A|G|46
5U9F|1|A|C|47
5U9F|1|A|C|48
5U9F|1|A|U|49
5U9F|1|A|A|50
5U9F|1|A|A|51
5U9F|1|A|C|52
*
5U9F|1|A|G|359
5U9F|1|A|G|360
5U9F|1|A|G|361
5U9F|1|A|G|362
5U9F|1|A|A|363
5U9F|1|A|A|364
5U9F|1|A|U|365
5U9F|1|A|A|366
5U9F|1|A|U|367
5U9F|1|A|U|368
5U9F|1|A|G|369
5U9F|1|A|C|370
*
5U9F|1|A|G|391
5U9F|1|A|C|392
5U9F|1|A|A|393
5U9F|1|A|G|394
5U9F|1|A|C|395
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain P
- 30S ribosomal protein S16
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