J3_5UYQ_005

3D structure

PDB id

5UYQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAU*AUUUAAAG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UYQ|1|01|G|1055
5UYQ|1|01|G|1056
5UYQ|1|01|A|1057
5UYQ|1|01|U|1058
*
5UYQ|1|01|A|1080
5UYQ|1|01|U|1081
5UYQ|1|01|U|1082
5UYQ|1|01|U|1083
5UYQ|1|01|A|1084
5UYQ|1|01|A|1085
5UYQ|1|01|A|1086
5UYQ|1|01|G|1087
*
5UYQ|1|01|C|1102
5UYQ|1|01|A|1103
5UYQ|1|01|C|1104

Current chains

Chain 01

23S ribosomal RNA

Nearby chains

Chain 10

50S ribosomal protein L10

Chain 11

50S ribosomal protein L11

Chain 34

50S ribosomal protein L36