J3_5V93_005

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CCGAAAG*CAG*CAAGG

Length

15 nucleotides

Bulged bases

5V93|1|A|A|1433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|C|1428
5V93|1|A|C|1429
5V93|1|A|G|1430
5V93|1|A|A|1431
5V93|1|A|A|1432
5V93|1|A|A|1433
5V93|1|A|G|1434
*
5V93|1|A|C|1860
5V93|1|A|A|1861
5V93|1|A|G|1862
*
5V93|1|A|C|1874
5V93|1|A|A|1875
5V93|1|A|A|1876
5V93|1|A|G|1877
5V93|1|A|G|1878

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17