J3_5V93_008

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGCCCGU*AAG*CGAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|C|1547
5V93|1|A|G|1548
5V93|1|A|C|1549
5V93|1|A|C|1550
5V93|1|A|C|1551
5V93|1|A|G|1552
5V93|1|A|U|1553
*
5V93|1|A|A|1652
5V93|1|A|A|1653
5V93|1|A|G|1654
*
5V93|1|A|C|1818
5V93|1|A|G|1819
5V93|1|A|A|1820
5V93|1|A|G|1821

Current chains

Chain A

23S rRNA

Nearby chains