J3_5V93_020

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGGAG*CUAC*GGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|a|C|936
5V93|1|a|G|937
5V93|1|a|G|938
5V93|1|a|A|939
5V93|1|a|G|940
*
5V93|1|a|C|1226
5V93|1|a|U|1227
5V93|1|a|A|1228
5V93|1|a|C|1229
*
5V93|1|a|G|1329
5V93|1|a|G|1330
5V93|1|a|A|1331
5V93|1|a|G|1332

Current chains

Chain a

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9

Chain m

30S ribosomal protein S13