J3_5V93_033
3D structure
- PDB id
- 5V93 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GUGAUCUA*UAGGG*CAAUCAAAC
- Length
- 22 nucleotides
- Bulged bases
- 5V93|1|A|U|815, 5V93|1|A|A|918, 5V93|1|A|A|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5V93|1|A|G|811
5V93|1|A|U|812
5V93|1|A|G|813
5V93|1|A|A|814
5V93|1|A|U|815
5V93|1|A|C|816
5V93|1|A|U|817
5V93|1|A|A|818
*
5V93|1|A|U|902
5V93|1|A|A|903
5V93|1|A|G|904
5V93|1|A|G|905
5V93|1|A|G|906
*
5V93|1|A|C|916
5V93|1|A|A|917
5V93|1|A|A|918
5V93|1|A|U|919
5V93|1|A|C|920
5V93|1|A|A|921
5V93|1|A|A|922
5V93|1|A|A|923
5V93|1|A|C|924
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain C
- 50S ribosomal protein L2
- Chain E
- 50S ribosomal protein L4
- Chain S
- 50S ribosomal protein L22
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