J3_5V93_040

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CCCCC*GGUUCAAUA*UAACCGG

Length

21 nucleotides

Bulged bases

5V93|1|A|C|3068, 5V93|1|A|A|3070, 5V93|1|A|C|3120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|C|3048
5V93|1|A|C|3049
5V93|1|A|C|3050
5V93|1|A|C|3051
5V93|1|A|C|3052
*
5V93|1|A|G|3064
5V93|1|A|G|3065
5V93|1|A|U|3066
5V93|1|A|U|3067
5V93|1|A|C|3068
5V93|1|A|A|3069
5V93|1|A|A|3070
5V93|1|A|U|3071
5V93|1|A|A|3072
*
5V93|1|A|U|3116
5V93|1|A|A|3117
5V93|1|A|A|3118
5V93|1|A|C|3119
5V93|1|A|C|3120
5V93|1|A|G|3121
5V93|1|A|G|3122

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17