J3_5V93_044

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UUUGACAUGCACAG*CCUGUGUGCAG*CUUAUG

Length

31 nucleotides

Bulged bases

5V93|1|a|U|1204, 5V93|1|a|U|1206

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|a|U|983
5V93|1|a|U|984
5V93|1|a|U|985
5V93|1|a|G|986
5V93|1|a|A|987
5V93|1|a|C|988
5V93|1|a|A|989
5V93|1|a|U|990
5V93|1|a|G|991
5V93|1|a|C|992
5V93|1|a|A|993
5V93|1|a|C|994
5V93|1|a|A|995
5V93|1|a|G|996
*
5V93|1|a|C|1028
5V93|1|a|C|1029
5V93|1|a|U|1030
5V93|1|a|G|1031
5V93|1|a|U|1032
5V93|1|a|G|1033
5V93|1|a|U|1034
5V93|1|a|G|1035
5V93|1|a|C|1036
5V93|1|a|A|1037
5V93|1|a|G|1038
*
5V93|1|a|C|1202
5V93|1|a|U|1203
5V93|1|a|U|1204
5V93|1|a|A|1205
5V93|1|a|U|1206
5V93|1|a|G|1207

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

30S ribosomal protein S14 type Z