J3_5V93_045
3D structure
- PDB id
- 5V93 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CUGUCGUCAG*CGCAACCC*GGAUGACGUCAAG
- Length
- 31 nucleotides
- Bulged bases
- 5V93|1|a|A|1188
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5V93|1|a|C|1050
5V93|1|a|U|1051
5V93|1|a|G|1052
5V93|1|a|U|1053
5V93|1|a|C|1054
5V93|1|a|G|1055
5V93|1|a|U|1056
5V93|1|a|C|1057
5V93|1|a|A|1058
5V93|1|a|G|1059
*
5V93|1|a|C|1098
5V93|1|a|G|1099
5V93|1|a|C|1100
5V93|1|a|A|1101
5V93|1|a|A|1102
5V93|1|a|C|1103
5V93|1|a|C|1104
5V93|1|a|C|1105
*
5V93|1|a|G|1178
5V93|1|a|G|1179
5V93|1|a|A|1180
5V93|1|a|U|1181
5V93|1|a|G|1182
5V93|1|a|A|1183
5V93|1|a|C|1184
5V93|1|a|G|1185
5V93|1|a|U|1186
5V93|1|a|C|1187
5V93|1|a|A|1188
5V93|1|a|A|1189
5V93|1|a|G|1190
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain e
- 30S ribosomal protein S5
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: