J3_5VPO_077

3D structure

PDB id

5VPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site ASL SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.34 Å

Loop

Sequence

GAAC*GGUGC*GAGC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPO|1|QA|G|1003
5VPO|1|QA|A|1004
5VPO|1|QA|A|1005
5VPO|1|QA|C|1006
*
5VPO|1|QA|G|1023
5VPO|1|QA|G|1024
5VPO|1|QA|U|1025
5VPO|1|QA|G|1026
5VPO|1|QA|C|1027
*
5VPO|1|QA|G|1034
5VPO|1|QA|A|1035
5VPO|1|QA|G|1036
5VPO|1|QA|C|1037

Current chains

Chain QA

16S rRNA

Nearby chains

Chain YA

Large subunit ribosomal RNA; LSU rRNA