J3_5VPO_078

3D structure

PDB id

5VPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site ASL SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.34 Å

Loop

Sequence

GGA*UUUAAAGAGUG*CUCAC

Length

19 nucleotides

Bulged bases

5VPO|1|RA|A|1088

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPO|1|RA|G|1055
5VPO|1|RA|G|1056
5VPO|1|RA|A|1057
*
5VPO|1|RA|U|1081
5VPO|1|RA|U|1082
5VPO|1|RA|U|1083
5VPO|1|RA|A|1084
5VPO|1|RA|A|1085
5VPO|1|RA|A|1086
5VPO|1|RA|G|1087
5VPO|1|RA|A|1088
5VPO|1|RA|G|1089
5VPO|1|RA|U|1090
5VPO|1|RA|G|1091
*
5VPO|1|RA|C|1100
5VPO|1|RA|U|1101
5VPO|1|RA|C|1102
5VPO|1|RA|A|1103
5VPO|1|RA|C|1104

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36