J3_5VPP_081

3D structure

PDB id

5VPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site tRNA SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GGAG*CUUUAAAG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPP|1|YA|G|1055
5VPP|1|YA|G|1056
5VPP|1|YA|A|1057
5VPP|1|YA|G|1058
*
5VPP|1|YA|C|1080
5VPP|1|YA|U|1081
5VPP|1|YA|U|1082
5VPP|1|YA|U|1083
5VPP|1|YA|A|1084
5VPP|1|YA|A|1085
5VPP|1|YA|A|1086
5VPP|1|YA|G|1087
*
5VPP|1|YA|C|1102
5VPP|1|YA|A|1103
5VPP|1|YA|C|1104

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y9

50S ribosomal protein L36