J3_5W4K_049

3D structure

PDB id

5W4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGAAC*GGUGCC*GGAGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5W4K|1|2a|G|1002
5W4K|1|2a|G|1003
5W4K|1|2a|A|1004
5W4K|1|2a|A|1005
5W4K|1|2a|C|1006
*
5W4K|1|2a|G|1023
5W4K|1|2a|G|1024
5W4K|1|2a|U|1025
5W4K|1|2a|G|1026
5W4K|1|2a|C|1027
5W4K|1|2a|C|1028
*
5W4K|1|2a|G|1033
5W4K|1|2a|G|1034
5W4K|1|2a|A|1035
5W4K|1|2a|G|1036
5W4K|1|2a|C|1037
5W4K|1|2a|C|1038

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains