J3_5W4K_070

3D structure

PDB id

5W4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CCUUG*CAG*CUUACGG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5W4K|1|2a|C|989
5W4K|1|2a|C|990
5W4K|1|2a|U|991
5W4K|1|2a|U|992
5W4K|1|2a|G|993
*
5W4K|1|2a|C|1045
5W4K|1|2a|A|1046
5W4K|1|2a|G|1047
*
5W4K|1|2a|C|1210
5W4K|1|2a|U|1211
5W4K|1|2a|U|1212
5W4K|1|2a|A|1213
5W4K|1|2a|C|1214
5W4K|1|2a|G|1215
5W4K|1|2a|G|1216

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2n

30S ribosomal protein S14 type Z