J3_5WE6_029

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

5WE6|1|A|U|321, 5WE6|1|A|C|323

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_5WE6_029 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.1521

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

5WE6|1|A|G|297
5WE6|1|A|G|298
5WE6|1|A|A|299
5WE6|1|A|A|300
5WE6|1|A|G|301
*
5WE6|1|A|C|316
5WE6|1|A|G|317
5WE6|1|A|C|318
5WE6|1|A|G|319
5WE6|1|A|A|320
5WE6|1|A|U|321
5WE6|1|A|A|322
5WE6|1|A|C|323
5WE6|1|A|A|324
5WE6|1|A|G|325
*
5WE6|1|A|C|337
5WE6|1|A|G|338
5WE6|1|A|U|339
5WE6|1|A|A|340
5WE6|1|A|C|341

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain U

50S ribosomal protein L24