3D structure

PDB id
5WFK (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
CAAUGGCGC*GCGUCGUAGUCC*GUCG
Length
25 nucleotides
Bulged bases
5WFK|1|a|U|1240, 5WFK|1|a|C|1302
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5WFK|1|a|C|1237
5WFK|1|a|A|1238
5WFK|1|a|A|1239
5WFK|1|a|U|1240
5WFK|1|a|G|1241
5WFK|1|a|G|1242
5WFK|1|a|C|1243
5WFK|1|a|G|1244
5WFK|1|a|C|1245
*
5WFK|1|a|G|1292
5WFK|1|a|C|1293
5WFK|1|a|G|1294
5WFK|1|a|U|1295
5WFK|1|a|C|1296
5WFK|1|a|G|1297
5WFK|1|a|U|1298
5WFK|1|a|A|1299
5WFK|1|a|G|1300
5WFK|1|a|U|1301
5WFK|1|a|C|1302
5WFK|1|a|C|1303
*
5WFK|1|a|G|1334
5WFK|1|a|U|1335
5WFK|1|a|C|1336
5WFK|1|a|G|1337

Current chains

Chain a
16S rRNA

Nearby chains

Chain g
30S ribosomal protein S7
Chain i
30S ribosomal protein S9
Chain m
30S ribosomal protein S13

Coloring options:

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