J3_5WFK_036

3D structure

PDB id

5WFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AGGC*GGAAUAUUG*CAGCCAU

Length

20 nucleotides

Bulged bases

5WFK|1|a|U|368, 5WFK|1|a|A|397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WFK|1|a|A|44
5WFK|1|a|G|45
5WFK|1|a|G|46
5WFK|1|a|C|47
*
5WFK|1|a|G|361
5WFK|1|a|G|362
5WFK|1|a|A|363
5WFK|1|a|A|364
5WFK|1|a|U|365
5WFK|1|a|A|366
5WFK|1|a|U|367
5WFK|1|a|U|368
5WFK|1|a|G|369
*
5WFK|1|a|C|392
5WFK|1|a|A|393
5WFK|1|a|G|394
5WFK|1|a|C|395
5WFK|1|a|C|396
5WFK|1|a|A|397
5WFK|1|a|U|398

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16

Chain y

Transfer RNA; tRNA

Chain z

Elongation factor Tu 2