J3_5WIT_050

3D structure

PDB id

5WIT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GGAAC*GGUGCCCC*GGGGAGCC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WIT|1|2a|G|1002
5WIT|1|2a|G|1003
5WIT|1|2a|A|1004
5WIT|1|2a|A|1005
5WIT|1|2a|C|1006
*
5WIT|1|2a|G|1023
5WIT|1|2a|G|1024
5WIT|1|2a|U|1025
5WIT|1|2a|G|1026
5WIT|1|2a|C|1027
5WIT|1|2a|C|1028
5WIT|1|2a|C|1029
5WIT|1|2a|C|1030
*
5WIT|1|2a|G|1031
5WIT|1|2a|G|1032
5WIT|1|2a|G|1033
5WIT|1|2a|G|1034
5WIT|1|2a|A|1035
5WIT|1|2a|G|1036
5WIT|1|2a|C|1037
5WIT|1|2a|C|1038

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains