J3_5WLC_007

3D structure

PDB id

5WLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the small subunit processome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUUGA*UAAUAG*CAUUAAU

Length

18 nucleotides

Bulged bases

5WLC|1|L1|U|864

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WLC|1|L1|G|631
5WLC|1|L1|U|632
5WLC|1|L1|U|633
5WLC|1|L1|G|634
5WLC|1|L1|A|635
*
5WLC|1|L1|U|861
5WLC|1|L1|A|862
5WLC|1|L1|A|863
5WLC|1|L1|U|864
5WLC|1|L1|A|865
5WLC|1|L1|G|866
*
5WLC|1|L1|C|962
5WLC|1|L1|A|963
5WLC|1|L1|U|964
5WLC|1|L1|U|965
5WLC|1|L1|A|966
5WLC|1|L1|A|967
5WLC|1|L1|U|968

Current chains

Chain L1

18S pre-rRNA

Nearby chains

Chain NF

rpS13_uS15