J3_5WNQ_019

3D structure

PDB id

5WNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGGAACCC*GGGGUGC*GAGCCC

Length

21 nucleotides

Bulged bases

5WNQ|1|A|A|1005

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WNQ|1|A|G|1002
5WNQ|1|A|G|1003
5WNQ|1|A|G|1003|||A
5WNQ|1|A|A|1004
5WNQ|1|A|A|1005
5WNQ|1|A|C|1006
5WNQ|1|A|C|1007
5WNQ|1|A|C|1008
*
5WNQ|1|A|G|1021
5WNQ|1|A|G|1022
5WNQ|1|A|G|1023
5WNQ|1|A|G|1024
5WNQ|1|A|U|1025
5WNQ|1|A|G|1026
5WNQ|1|A|C|1027
*
5WNQ|1|A|G|1034
5WNQ|1|A|A|1035
5WNQ|1|A|G|1036
5WNQ|1|A|C|1037
5WNQ|1|A|C|1038
5WNQ|1|A|C|1039

Current chains

Chain A

16S Ribosomal RNA rRNA

Nearby chains