J3_5WNR_017

3D structure

PDB id

5WNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGAACCCG*UGGGGUGC*GAGCCC

Length

22 nucleotides

Bulged bases

5WNR|1|A|A|1005

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WNR|1|A|G|1003
5WNR|1|A|G|1003|||A
5WNR|1|A|A|1004
5WNR|1|A|A|1005
5WNR|1|A|C|1006
5WNR|1|A|C|1007
5WNR|1|A|C|1008
5WNR|1|A|G|1009
*
5WNR|1|A|U|1020
5WNR|1|A|G|1021
5WNR|1|A|G|1022
5WNR|1|A|G|1023
5WNR|1|A|G|1024
5WNR|1|A|U|1025
5WNR|1|A|G|1026
5WNR|1|A|C|1027
*
5WNR|1|A|G|1034
5WNR|1|A|A|1035
5WNR|1|A|G|1036
5WNR|1|A|C|1037
5WNR|1|A|C|1038
5WNR|1|A|C|1039

Current chains

Chain A

16S Ribosomal RNA rRNA

Nearby chains