J3_5XYU_007
3D structure
- PDB id
- 5XYU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Small subunit of Mycobacterium smegmatis ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.45 Å
Loop
- Sequence
- GGAUUAAUUC*GAAGAACCUUAC*GGCUUCAC
- Length
- 30 nucleotides
- Bulged bases
- 5XYU|1|A|A|957, 5XYU|1|A|G|958, 5XYU|1|A|A|960
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5XYU|1|A|G|935
5XYU|1|A|G|936
5XYU|1|A|A|937
5XYU|1|A|U|938
5XYU|1|A|U|939
5XYU|1|A|A|940
5XYU|1|A|A|941
5XYU|1|A|U|942
5XYU|1|A|U|943
5XYU|1|A|C|944
*
5XYU|1|A|G|955
5XYU|1|A|A|956
5XYU|1|A|A|957
5XYU|1|A|G|958
5XYU|1|A|A|959
5XYU|1|A|A|960
5XYU|1|A|C|961
5XYU|1|A|C|962
5XYU|1|A|U|963
5XYU|1|A|U|964
5XYU|1|A|A|965
5XYU|1|A|C|966
*
5XYU|1|A|G|1202
5XYU|1|A|G|1203
5XYU|1|A|C|1204
5XYU|1|A|U|1205
5XYU|1|A|U|1206
5XYU|1|A|C|1207
5XYU|1|A|A|1208
5XYU|1|A|C|1209
Current chains
- Chain A
- 16S RNA
Nearby chains
- Chain J
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S13
- Chain N
- 30S ribosomal protein S14 type Z
- Chain S
- 30S ribosomal protein S19
Coloring options: