J3_5ZET_003

3D structure

PDB id

5ZET (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUG*CGAGUAG*UGAAUC

Length

16 nucleotides

Bulged bases

5ZET|1|A|U|318, 5ZET|1|A|G|458

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZET|1|A|G|317
5ZET|1|A|U|318
5ZET|1|A|G|319
*
5ZET|1|A|C|457
5ZET|1|A|G|458
5ZET|1|A|A|459
5ZET|1|A|G|460
5ZET|1|A|U|461
5ZET|1|A|A|462
5ZET|1|A|G|463
*
5ZET|1|A|U|487
5ZET|1|A|G|488
5ZET|1|A|A|489
5ZET|1|A|A|490
5ZET|1|A|U|491
5ZET|1|A|C|492

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L9

Chain Y

50S ribosomal protein L28