J3_6AGB_001
3D structure
- PDB id
- 6AGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of yeast Ribonuclease P
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.48 Å
Loop
- Sequence
- AAUUCCUACGAUUAAGAAA*UGGGAAA*UUACU
- Length
- 31 nucleotides
- Bulged bases
- 6AGB|1|A|U|16, 6AGB|1|A|A|27, 6AGB|1|A|G|29, 6AGB|1|A|G|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6AGB|1|A|A|14
6AGB|1|A|A|15
6AGB|1|A|U|16
6AGB|1|A|U|17
6AGB|1|A|C|18
6AGB|1|A|C|19
6AGB|1|A|U|20
6AGB|1|A|A|21
6AGB|1|A|C|22
6AGB|1|A|G|23
6AGB|1|A|A|24
6AGB|1|A|U|25
6AGB|1|A|U|26
6AGB|1|A|A|27
6AGB|1|A|A|28
6AGB|1|A|G|29
6AGB|1|A|A|30
6AGB|1|A|A|31
6AGB|1|A|A|32
*
6AGB|1|A|U|85
6AGB|1|A|G|86
6AGB|1|A|G|87
6AGB|1|A|G|88
6AGB|1|A|A|89
6AGB|1|A|A|90
6AGB|1|A|A|91
*
6AGB|1|A|U|351
6AGB|1|A|U|352
6AGB|1|A|A|353
6AGB|1|A|C|354
6AGB|1|A|U|355
Current chains
- Chain A
- Ribonuclease P RNA
Nearby chains
- Chain B
- Ribonucleases P/MRP protein subunit POP1
- Chain D
- RNases MRP/P 32.9 kDa subunit
- Chain E
- Ribonuclease P/MRP protein subunit POP5
- Chain F
- Ribonucleases P/MRP protein subunit POP6
- Chain G
- Ribonucleases P/MRP protein subunit POP7
- Chain I
- Ribonuclease P/MRP protein subunit RPP1
- Chain J
- Ribonuclease P/MRP protein subunit RPP1
Coloring options: