Loop J3_6AH3

3D structure

PDB id: 6AH3 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Cryo-EM structure of yeast Ribonuclease P with pre-tRNA substrate
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.48 Å

Loop

Sequence: AAUUCCUACGAUUAAGAAAC*GUGGGAAAUUC*GAUUACU
Length: 38 nucleotides
Bulged bases: 6AH3|1|A|U|16, 6AH3|1|A|A|27, 6AH3|1|A|G|29, 6AH3|1|A|G|86
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6AH3|1|A|A|14
6AH3|1|A|A|15
6AH3|1|A|U|16
6AH3|1|A|U|17
6AH3|1|A|C|18
6AH3|1|A|C|19
6AH3|1|A|U|20
6AH3|1|A|A|21
6AH3|1|A|C|22
6AH3|1|A|G|23
6AH3|1|A|A|24
6AH3|1|A|U|25
6AH3|1|A|U|26
6AH3|1|A|A|27
6AH3|1|A|A|28
6AH3|1|A|G|29
6AH3|1|A|A|30
6AH3|1|A|A|31
6AH3|1|A|A|32
6AH3|1|A|C|33
*
6AH3|1|A|G|84
6AH3|1|A|U|85
6AH3|1|A|G|86
6AH3|1|A|G|87
6AH3|1|A|G|88
6AH3|1|A|A|89
6AH3|1|A|A|90
6AH3|1|A|A|91
6AH3|1|A|U|92
6AH3|1|A|U|93
6AH3|1|A|C|94
*
6AH3|1|A|G|349
6AH3|1|A|A|350
6AH3|1|A|U|351
6AH3|1|A|U|352
6AH3|1|A|A|353
6AH3|1|A|C|354
6AH3|1|A|U|355

Current chains

Chain A: Ribonuclease P RNA

Nearby chains

Chain B: Ribonucleases P/MRP protein subunit POP1
Chain D: RNases MRP/P 32.9 kDa subunit
Chain E: Ribonuclease P/MRP protein subunit POP5
Chain F: Ribonucleases P/MRP protein subunit POP6
Chain G: Ribonucleases P/MRP protein subunit POP7
Chain I: Ribonuclease P/MRP protein subunit RPP1
Chain J: Ribonuclease P/MRP protein subunit RPP1
Chain T: Transfer RNA; tRNA

J3_6AH3_001