Loop J3_6AHR

3D structure

PDB id: 6AHR (explore in PDB, NAKB, or RNA 3D Hub)
Description: Cryo-EM structure of human Ribonuclease P
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.92 Å

Loop

Sequence: GACUAGG*CAGCGAAGUGAGUUCAAUGGCUGAGG*UAACCCAAU
Length: 42 nucleotides
Bulged bases: 6AHR|1|A|C|87, 6AHR|1|A|U|88, 6AHR|1|A|G|90, 6AHR|1|A|G|263, 6AHR|1|A|A|264, 6AHR|1|A|G|268, 6AHR|1|A|C|273, 6AHR|1|A|A|274, 6AHR|1|A|G|277, 6AHR|1|A|C|314
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6AHR|1|A|G|85
6AHR|1|A|A|86
6AHR|1|A|C|87
6AHR|1|A|U|88
6AHR|1|A|A|89
6AHR|1|A|G|90
6AHR|1|A|G|91
*
6AHR|1|A|C|259
6AHR|1|A|A|260
6AHR|1|A|G|261
6AHR|1|A|C|262
6AHR|1|A|G|263
6AHR|1|A|A|264
6AHR|1|A|A|265
6AHR|1|A|G|266
6AHR|1|A|U|267
6AHR|1|A|G|268
6AHR|1|A|A|269
6AHR|1|A|G|270
6AHR|1|A|U|271
6AHR|1|A|U|272
6AHR|1|A|C|273
6AHR|1|A|A|274
6AHR|1|A|A|275
6AHR|1|A|U|276
6AHR|1|A|G|277
6AHR|1|A|G|278
6AHR|1|A|C|279
6AHR|1|A|U|280
6AHR|1|A|G|281
6AHR|1|A|A|282
6AHR|1|A|G|283
6AHR|1|A|G|284
*
6AHR|1|A|U|309
6AHR|1|A|A|310
6AHR|1|A|A|311
6AHR|1|A|C|312
6AHR|1|A|C|313
6AHR|1|A|C|314
6AHR|1|A|A|315
6AHR|1|A|A|316
6AHR|1|A|U|317

Current chains

Chain A: H1 RNA

Nearby chains

Chain B: Ribonucleases P/MRP protein subunit POP1
Chain E: Ribonuclease P/MRP protein subunit POP5
Chain G: Ribonuclease P protein subunit p20
Chain H: Ribonuclease P protein subunit p14
Chain I: Ribonuclease P protein subunit p30
Chain J: Ribonuclease P protein subunit p30
Chain L: Ribonuclease P protein subunit p40

J3_6AHR_002