J3_6BOK_019
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- CAAG*CGCAAAC*GUG
- Length
- 14 nucleotides
- Bulged bases
- 6BOK|1|B|A|1609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BOK_019 not in the Motif Atlas
- Homologous match to J3_7RQB_008
- Geometric discrepancy: 0.0606
- The information below is about J3_7RQB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_16623.1
- Basepair signature
- cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
6BOK|1|B|C|1306
6BOK|1|B|A|1307
6BOK|1|B|A|1308
6BOK|1|B|G|1309
*
6BOK|1|B|C|1605
6BOK|1|B|G|1606
6BOK|1|B|C|1607
6BOK|1|B|A|1608
6BOK|1|B|A|1609
6BOK|1|B|A|1610
6BOK|1|B|C|1611
*
6BOK|1|B|G|1620
6BOK|1|B|U|1621
6BOK|1|B|G|1622
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain EA
- 50S ribosomal protein L34
Coloring options: