J3_6BZ6_016
3D structure
- PDB id
- 6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.18 Å
Loop
- Sequence
- UAAAC*GGGUCGUG*CG
- Length
- 15 nucleotides
- Bulged bases
- 6BZ6|1|RA|U|271|||C
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6BZ6_016 not in the Motif Atlas
- Homologous match to J3_7RQB_003
- Geometric discrepancy: 0.0934
- The information below is about J3_7RQB_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_97921.1
- Basepair signature
- cWW-F-F-tSH-tWH-F-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
6BZ6|1|RA|U|269
6BZ6|1|RA|A|270
6BZ6|1|RA|A|270|||A
6BZ6|1|RA|A|270|||B
6BZ6|1|RA|C|270|||C
*
6BZ6|1|RA|G|270|||W
6BZ6|1|RA|G|270|||X
6BZ6|1|RA|G|270|||Y
6BZ6|1|RA|U|270|||Z
6BZ6|1|RA|C|271|||A
6BZ6|1|RA|G|271|||B
6BZ6|1|RA|U|271|||C
6BZ6|1|RA|G|271|||D
*
6BZ6|1|RA|C|366
6BZ6|1|RA|G|370
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R1
- 50S ribosomal protein L28
- Chain RI
- 50S ribosomal protein L9
Coloring options: