3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
CGG*CUAG*CG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_6BZ6_029 not in the Motif Atlas
Geometric match to J3_4LFB_011
Geometric discrepancy: 0.1353
The information below is about J3_4LFB_011
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_56052.5
Basepair signature
cWW-F-cWW-cWW-F
Number of instances in this motif group
5

Unit IDs

6BZ6|1|XA|C|586
6BZ6|1|XA|G|587
6BZ6|1|XA|G|588
*
6BZ6|1|XA|C|651
6BZ6|1|XA|U|652
6BZ6|1|XA|A|653
6BZ6|1|XA|G|654
*
6BZ6|1|XA|C|754
6BZ6|1|XA|G|755

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XH
30S ribosomal protein S8
Chain XL
30S ribosomal protein S12
Chain XO
30S ribosomal protein S15
Chain XQ
30S ribosomal protein S17

Coloring options:


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