J3_6BZ8_032

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CAAG*CUAGUAA*UGAAUACG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6BZ8_032 not in the Motif Atlas

Homologous match to J3_4LFB_002

Geometric discrepancy: 0.123

The information below is about J3_4LFB_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_25303.4

Basepair signature

cWW-F-F-cSS-F-cWW-tWW-F-tWH-F-tHS-cSH-cWW

Number of instances in this motif group

4

Unit IDs

6BZ8|1|XA|C|936
6BZ8|1|XA|A|937
6BZ8|1|XA|A|938
6BZ8|1|XA|G|939
*
6BZ8|1|XA|C|1344
6BZ8|1|XA|U|1345
6BZ8|1|XA|A|1346
6BZ8|1|XA|G|1347
6BZ8|1|XA|U|1348
6BZ8|1|XA|A|1349
6BZ8|1|XA|A|1350
*
6BZ8|1|XA|U|1372
6BZ8|1|XA|G|1373
6BZ8|1|XA|A|1374
6BZ8|1|XA|A|1375
6BZ8|1|XA|U|1376
6BZ8|1|XA|A|1377
6BZ8|1|XA|C|1378
6BZ8|1|XA|G|1379

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XG

30S ribosomal protein S7

Chain XI

30S ribosomal protein S9

Chain XW

Transfer RNA; tRNA