J3_6BZ8_048

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CAAG*CGCAAAC*GUG

Length

14 nucleotides

Bulged bases

6BZ8|1|YA|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6BZ8_048 not in the Motif Atlas

Homologous match to J3_7RQB_008

Geometric discrepancy: 0.0749

The information below is about J3_7RQB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_16623.1

Basepair signature

cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

6BZ8|1|YA|C|1306
6BZ8|1|YA|A|1307
6BZ8|1|YA|A|1308
6BZ8|1|YA|G|1309
*
6BZ8|1|YA|C|1605
6BZ8|1|YA|G|1606
6BZ8|1|YA|C|1607
6BZ8|1|YA|A|1608
6BZ8|1|YA|A|1609
6BZ8|1|YA|A|1610
6BZ8|1|YA|C|1611
*
6BZ8|1|YA|G|1620
6BZ8|1|YA|U|1621
6BZ8|1|YA|G|1622

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y7

50S ribosomal protein L34