J3_6C0F_010
3D structure
- PDB id
- 6C0F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast nucleolar pre-60S ribosomal subunit (state 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGACAUG*UGGG*CAUAAU
- Length
- 17 nucleotides
- Bulged bases
- 6C0F|1|1|C|439, 6C0F|1|1|U|620
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6C0F|1|1|A|436
6C0F|1|1|G|437
6C0F|1|1|A|438
6C0F|1|1|C|439
6C0F|1|1|A|440
6C0F|1|1|U|441
6C0F|1|1|G|442
*
6C0F|1|1|U|492
6C0F|1|1|G|493
6C0F|1|1|G|494
6C0F|1|1|G|495
*
6C0F|1|1|C|618
6C0F|1|1|A|619
6C0F|1|1|U|620
6C0F|1|1|A|621
6C0F|1|1|A|622
6C0F|1|1|U|623
Current chains
- Chain 1
- Saccharomyces cerevisiae S288c 35S pre-ribosomal RNA miscRNA
Nearby chains
- Chain D
- Protein MAK16
- Chain E
- 60S ribosomal protein L6-A
- Chain I
- Ribosome production factor 1
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
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